基因数据处理70之Picard安装没成功
2016-06-07 20:37
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1.下载:
2.安装:
https://github.com/broadinstitute/picard.git
2.安装:
hadoop@Master:~/xubo/tools/picard$ ant clone-htsjdk Buildfile: /home/hadoop/xubo/tools/picard/build.xml clone-htsjdk: [exec] Cloning into 'htsjdk'... [echo] Checking out HTSJDK tagged version [2.4.1] [exec] Note: checking out '2.4.1'. [exec] [exec] You are in 'detached HEAD' state. You can look around, make experimental [exec] changes and commit them, and you can discard any commits you make in this [exec] state without impacting any branches by performing another checkout. [exec] [exec] If you want to create a new branch to retain commits you create, you may [exec] do so (now or later) by using -b with the checkout command again. Example: [exec] [exec] git checkout -b new_branch_name [exec] [exec] HEAD is now at 52df499... Merge pull request #615 from samtools/dr_disable_intel_gkl BUILD SUCCESSFUL Total time: 34 minutes 17 seconds hadoop@Master:~/xubo/tools/picard$ ant Buildfile: /home/hadoop/xubo/tools/picard/build.xml write-version-property: [propertyfile] Creating new property file: /home/hadoop/xubo/tools/picard/htsjdk/htsjdk.version.properties set-htsjdk-version: compile-htsjdk: [exec] :compileJava FAILED [exec] [exec] FAILURE: Build failed with an exception. [exec] [exec] * What went wrong: [exec] Execution failed for task ':compileJava'. [exec] > invalid source release: 1.8 [exec] [exec] * Try: [exec] Run with --stacktrace option to get the stack trace. Run with --info or --debug [exec] BUILD FAILED [exec] [exec] Total time: 26.918 secs [exec] option to get more log output. [exec] Result: 1 BUILD FAILED /home/hadoop/xubo/tools/picard/build.xml:174: /home/hadoop/xubo/tools/picard/htsjdk/build/libs does not exist. Total time: 47 seconds hadoop@Master:~/xubo/tools/picard$
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