问题之htslib安装时没有zlib

问题之htslib安装时没有zlib

问题：

HTSlib uses compression routines from the zlib library <http://zlib.net>.
Building HTSlib requires zlib development files to be installed on the build
machine; you may need to ensure a package such as zlib1g-dev (on Debian or
Ubuntu Linux) or zlib-devel (on RPM-based Linux distributions) is installed.

FAILED. This error must be resolved in order to build HTSlib successfully.


解决办法：

hadoop@Mcnode6:~/cloud/adam/xubo/htslib$ sudo apt-get install zlib1g-dev
Reading package lists... Done
Building dependency tree
Reading state information... Done
The following NEW packages will be installed:
zlib1g-dev
0 upgraded, 1 newly installed, 0 to remove and 490 not upgraded.
Need to get 183 kB of archives.
After this operation, 454 kB of additional disk space will be used.
Get:1 http://cn.archive.ubuntu.com/ubuntu/ trusty/main zlib1g-dev amd64 1:1.2.8.dfsg-1ubuntu1 [183 kB]
Fetched 183 kB in 20s (9,051 B/s)
Selecting previously unselected package zlib1g-dev:amd64.
(Reading database ... 174351 files and directories currently installed.)
Preparing to unpack .../zlib1g-dev_1%3a1.2.8.dfsg-1ubuntu1_amd64.deb ...
Unpacking zlib1g-dev:amd64 (1:1.2.8.dfsg-1ubuntu1) ...
Processing triggers for man-db (2.6.7.1-1ubuntu1) ...
Setting up zlib1g-dev:amd64 (1:1.2.8.dfsg-1ubuntu1) ...
hadoop@Mcnode6:~/cloud/adam/xubo/htslib$ ./configure
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking for ranlib... ranlib
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking how to run the C preprocessor... gcc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for stdlib.h... (cached) yes
checking for unistd.h... (cached) yes
checking for sys/param.h... yes
checking for getpagesize... yes
checking for working mmap... yes
checking for gmtime_r... yes
checking for zlib.h... yes
checking for inflate in -lz... yes
configure: creating ./config.status
config.status: creating config.mk
config.status: creating config.h
config.status: config.h is unchanged